Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRTM1Q9HBL6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 AC009477.1-201ENST00000452936 217 ntBASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 GAPDHP40-201ENST00000505218 1006 ntBASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 AC009407.1-201ENST00000568958 598 ntBASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.65□□□□□ -0.06
LRTM1Q9HBL6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
LRTM1Q9HBL6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 BX640514.1-201ENST00000583223 1918 ntBASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AL157414.3-201ENST00000624276 1954 ntBASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 AL391069.4-201ENST00000609583 481 ntBASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRTM1Q9HBL6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms