Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC023024.2-201ENST00000623561 1993 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 MBP-201ENST00000354542 575 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RNA5SP359-201ENST00000364838 113 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC234644.1-201ENST00000406065 370 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL807761.2-201ENST00000422849 729 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL627422.1-201ENST00000434104 580 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 OR2R1P-201ENST00000441404 914 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RPSAP15-201ENST00000448168 861 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC079112.1-201ENST00000454972 939 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 MIR3180-2-201ENST00000581748 88 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC009560.1-201ENST00000620208 434 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC133540.1-201ENST00000620845 1019 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AL118508.1-201ENST00000613502 2345 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 C18orf15-201ENST00000623680 2534 ntBASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC7.7□□□□□ -1.18
KRTAP4-1Q9BYQ7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC7.69□□□□□ -1.18
KRTAP4-1Q9BYQ7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
KRTAP4-1Q9BYQ7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms