Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CMSS1Q9BQ75 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CMSS1Q9BQ75 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 MIR940-201ENST00000401276 94 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 MKNK2P1-201ENST00000437526 628 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 ALG1L8P-201ENST00000533887 760 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 AC003101.2-201ENST00000612557 442 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 AC018529.1-201ENST00000613063 361 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 LINC01230-201ENST00000625222 3017 ntBASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.08□□□□□ -0.32
CMSS1Q9BQ75 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 AC073869.1-201ENST00000415574 2762 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 SPDYE17-201ENST00000412399 783 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 KRT18P32-201ENST00000424695 1287 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 TARDBPP1-201ENST00000442013 1203 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 BEND3P1-201ENST00000421591 1944 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.07□□□□□ -0.32
CMSS1Q9BQ75 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CMSS1Q9BQ75 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms