Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
VGLL1Q99990 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC012508.2-201ENST00000567613 1472 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 AL035456.1-201ENST00000456064 1369 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 BX640514.1-201ENST00000583223 1918 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 REXO1L4P-201ENST00000605109 1937 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC004461.1-201ENST00000412461 403 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 GPS2P2-201ENST00000430745 888 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 SPDYE14P-201ENST00000442619 822 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 DNAJB3-201ENST00000446806 729 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 AL079307.3-201ENST00000556114 283 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC026150.2-201ENST00000564693 1156 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC005829.1-201ENST00000570002 483 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.59□□□□□ -0.55
VGLL1Q99990 MIR4453-201ENST00000584019 89 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 AL513210.1-201ENST00000629608 234 ntBASIC11.59□□□□□ -0.55
VGLL1Q99990 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.59□□□□□ -0.55
VGLL1Q99990 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VGLL1Q99990 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.59□□□□□ -0.55
VGLL1Q99990 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
VGLL1Q99990 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
VGLL1Q99990 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.58□□□□□ -0.56
VGLL1Q99990 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.58□□□□□ -0.56
VGLL1Q99990 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VGLL1Q99990 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms