Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AC006453.1-201ENST00000636037 1257 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
EYA3Q99504 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 AC006058.4-201ENST00000624016 1670 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 AC105250.1-201ENST00000509378 2057 ntBASIC18.27■□□□□ 0.51
EYA3Q99504 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.27■□□□□ 0.51
EYA3Q99504 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
EYA3Q99504 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
EYA3Q99504 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.27■□□□□ 0.51
EYA3Q99504 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
EYA3Q99504 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 VDAC1P1-201ENST00000439229 848 ntBASIC18.26■□□□□ 0.51
EYA3Q99504 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.26■□□□□ 0.51
EYA3Q99504 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 AC116345.2-201ENST00000512837 523 ntBASIC18.26■□□□□ 0.51
EYA3Q99504 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.26■□□□□ 0.51
EYA3Q99504 AC009884.2-201ENST00000603110 324 ntBASIC18.26■□□□□ 0.51
EYA3Q99504 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
EYA3Q99504 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.26■□□□□ 0.51
EYA3Q99504 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
EYA3Q99504 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
EYA3Q99504 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
EYA3Q99504 AC244394.1-201ENST00000435000 1665 ntBASIC18.25■□□□□ 0.51
EYA3Q99504 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.25■□□□□ 0.51
EYA3Q99504 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.25■□□□□ 0.51
EYA3Q99504 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.25■□□□□ 0.51
EYA3Q99504 CEP164P1-201ENST00000455142 418 ntBASIC18.25■□□□□ 0.51
EYA3Q99504 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.25■□□□□ 0.51
EYA3Q99504 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.25■□□□□ 0.51
EYA3Q99504 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.25■□□□□ 0.51
EYA3Q99504 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.25■□□□□ 0.51
EYA3Q99504 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
EYA3Q99504 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
EYA3Q99504 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.25■□□□□ 0.51
EYA3Q99504 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EYA3Q99504 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.24■□□□□ 0.51
EYA3Q99504 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EYA3Q99504 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms