Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 NKAIN1P1-201ENST00000435754 582 ntBASIC17.77■□□□□ 0.44
TRIM47Q96LD4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 CU633904.3-201ENST00000624042 1029 ntBASIC17.77■□□□□ 0.44
TRIM47Q96LD4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 AL354989.2-201ENST00000435838 1540 ntBASIC17.77■□□□□ 0.43
TRIM47Q96LD4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM47Q96LD4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 AL133466.1-201ENST00000447582 150 ntBASIC17.76■□□□□ 0.43
TRIM47Q96LD4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.76■□□□□ 0.43
TRIM47Q96LD4 AP001505.2-201ENST00000616815 443 ntBASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 AC136621.1-201ENST00000624017 2304 ntBASIC17.76■□□□□ 0.43
TRIM47Q96LD4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM47Q96LD4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SSR4P1-203ENST00000599569 2260 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC092978.1-202ENST00000637590 1327 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC103702.1-201ENST00000548801 2630 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 MIR769-201ENST00000390225 118 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AL133267.1-201ENST00000398220 340 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 MAGEA5-201ENST00000446757 942 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 SPTLC1P5-201ENST00000450718 252 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 FTLP10-202ENST00000505798 471 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AC044849.1-201ENST00000519737 1188 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM47Q96LD4 MIR7845-201ENST00000618396 99 ntBASIC17.75■□□□□ 0.43
TRIM47Q96LD4 BX539320.1-201ENST00000623759 877 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms