Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CPNE2Q96FN4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AC232323.1-201ENST00000540724 2099 ntBASIC13.3□□□□□ -0.28
CPNE2Q96FN4 REXO1L5P-201ENST00000622260 2098 ntBASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AC015922.1-201ENST00000421102 1152 ntBASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AL121894.2-201ENST00000602977 491 ntBASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AP001059.3-201ENST00000619053 235 ntBASIC13.3□□□□□ -0.28
CPNE2Q96FN4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CPNE2Q96FN4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 REXO1L2P-201ENST00000425429 2069 ntBASIC13.29□□□□□ -0.28
CPNE2Q96FN4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.29□□□□□ -0.28
CPNE2Q96FN4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms