Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCDC107Q8WV48 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 MIR193BHG-211ENST00000641433 5365 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AP000347.1-202ENST00000435868 847 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 DNAJB3-201ENST00000446806 729 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AC003101.2-201ENST00000612557 442 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AC055717.3-201ENST00000622967 595 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 STRCP1-201ENST00000509801 5328 ntBASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCDC107Q8WV48 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 FAM58DP-201ENST00000428076 619 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AL353705.2-201ENST00000428243 662 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ALG1L8P-201ENST00000533887 760 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MIR3687-2-201ENST00000577708 61 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 AC010327.4-202ENST00000591484 748 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 MIR3687-1-201ENST00000614492 61 ntBASIC13.22□□□□□ -0.29
CCDC107Q8WV48 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCDC107Q8WV48 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms