Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 SERBP1P3-201ENST00000459980 809 ntBASIC13.8□□□□□ -0.2
SNX33Q8WV41 HLA-V-204ENST00000476601 1289 ntBASIC13.8□□□□□ -0.2
SNX33Q8WV41 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SNX33Q8WV41 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.8□□□□□ -0.2
SNX33Q8WV41 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SNX33Q8WV41 REXO1L2P-201ENST00000425429 2069 ntBASIC13.79□□□□□ -0.2
SNX33Q8WV41 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AL031595.1-201ENST00000623969 4709 ntBASIC13.79□□□□□ -0.2
SNX33Q8WV41 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC241585.1-201ENST00000433527 519 ntBASIC13.79□□□□□ -0.2
SNX33Q8WV41 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 INGX-202ENST00000489074 768 ntBASIC13.79□□□□□ -0.2
SNX33Q8WV41 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SPDYE12P-201ENST00000618416 771 ntBASIC13.79□□□□□ -0.2
SNX33Q8WV41 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.79□□□□□ -0.2
SNX33Q8WV41 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SNX33Q8WV41 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms