Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AC097359.2-201ENST00000604992 2389 ntBASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 KRT18P13-201ENST00000400056 1290 ntBASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 KRT18P2-201ENST00000447938 1258 ntBASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AC092865.5-201ENST00000545435 363 ntBASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IL1Q8TBN0 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 AC034105.1-201ENST00000563488 319 ntBASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 LINC01225-203ENST00000563550 1244 ntBASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 AC084121.4-201ENST00000641598 221 ntBASIC15.21■□□□□ 0.03
RAB3IL1Q8TBN0 AF228730.8-201ENST00000642140 221 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms