Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AC084364.1-201ENST00000551967 1556 ntBASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AL009183.1-201ENST00000603760 355 ntBASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AC008735.5-201ENST00000623544 497 ntBASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LYSMD2Q8IV50 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AC105339.3-201ENST00000560043 636 ntBASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AC091304.2-201ENST00000564639 760 ntBASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 TCAM1P-207ENST00000485295 1537 ntBASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 PMS2P7-201ENST00000506558 1336 ntBASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LYSMD2Q8IV50 DMBT1P1-203ENST00000636837 4628 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AP002414.3-201ENST00000589352 1468 ntBASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LYSMD2Q8IV50 AC111170.3-201ENST00000624282 2464 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms