Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC055876.2-201ENST00000531834 546 ntBASIC13.5□□□□□ -0.25
RTTNQ86VV8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AL158212.4-201ENST00000624062 1286 ntBASIC13.5□□□□□ -0.25
RTTNQ86VV8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC020907.1-201ENST00000616460 1350 ntBASIC13.5□□□□□ -0.25
RTTNQ86VV8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 GOLGA2P4-201ENST00000441462 777 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 BNIP3P42-201ENST00000454982 569 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 BNIP3P29-201ENST00000598302 571 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 AC011447.5-201ENST00000616168 564 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 PTENP1-202ENST00000532280 3996 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AC104457.1-201ENST00000401024 814 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 AC093525.8-201ENST00000624099 1342 ntBASIC13.49□□□□□ -0.25
RTTNQ86VV8 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RTTNQ86VV8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTTNQ86VV8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms