Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
LCA10Q71F78 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC8.28□□□□□ -1.08
LCA10Q71F78 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 POM121L3P-201ENST00000419331 1163 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 IGHV3-47-201ENST00000425060 335 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 ABCD1P5-201ENST00000445663 754 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC104819.1-201ENST00000504587 486 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 FAM86EP-206ENST00000510506 987 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 AP000867.3-201ENST00000524675 377 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC8.28□□□□□ -1.08
LCA10Q71F78 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC8.28□□□□□ -1.08
LCA10Q71F78 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC073592.4-201ENST00000623827 446 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC8.28□□□□□ -1.08
LCA10Q71F78 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC087164.2-201ENST00000624514 3130 ntBASIC8.28□□□□□ -1.08
LCA10Q71F78 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC8.28□□□□□ -1.08
LCA10Q71F78 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LCA10Q71F78 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LCA10Q71F78 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
LCA10Q71F78 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
LCA10Q71F78 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
LCA10Q71F78 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LCA10Q71F78 INTS4P1-203ENST00000641008 3683 ntBASIC8.27□□□□□ -1.08
LCA10Q71F78 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
LCA10Q71F78 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LCA10Q71F78 SLC22A20-204ENST00000530038 1673 ntBASIC8.27□□□□□ -1.08
LCA10Q71F78 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.08
LCA10Q71F78 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.08
LCA10Q71F78 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC8.27□□□□□ -1.09
LCA10Q71F78 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 PCDHB19P-202ENST00000625133 2914 ntBASIC8.27□□□□□ -1.09
LCA10Q71F78 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
LCA10Q71F78 GOLGA2P5-201ENST00000266746 2395 ntBASIC8.27□□□□□ -1.09
LCA10Q71F78 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC8.27□□□□□ -1.09
LCA10Q71F78 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LCA10Q71F78 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC8.27□□□□□ -1.09
LCA10Q71F78 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC8.27□□□□□ -1.09
LCA10Q71F78 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC8.27□□□□□ -1.09
LCA10Q71F78 TOP3BP1-201ENST00000420768 1380 ntBASIC8.27□□□□□ -1.09
LCA10Q71F78 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LCA10Q71F78 GGT4P-201ENST00000623672 1708 ntBASIC8.27□□□□□ -1.09
LCA10Q71F78 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC8.27□□□□□ -1.09
LCA10Q71F78 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LCA10Q71F78 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms