Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AC104457.1-201ENST00000401024 814 ntBASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 AL121723.1-201ENST00000445194 1519 ntBASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMARCD3Q6STE5 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TOMM22P5-201ENST00000416399 439 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AC254562.1-201ENST00000417586 456 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 HLA-V-204ENST00000476601 1289 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AC069262.1-201ENST00000539058 672 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 LINC01115-203ENST00000606068 577 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 AC074044.1-201ENST00000609673 707 ntBASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SMARCD3Q6STE5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMARCD3Q6STE5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms