Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTC1Q2NKJ3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CTC1Q2NKJ3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTC1Q2NKJ3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTC1Q2NKJ3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTC1Q2NKJ3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 FAM8A4P-201ENST00000435433 1213 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC005730.2-201ENST00000564549 1184 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PPY2P-201ENST00000582808 702 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC100757.4-201ENST00000626934 759 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC008132.1-202ENST00000342005 1389 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 SNX18-202ENST00000343017 3140 ntBASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CTC1Q2NKJ3 AC006480.2-201ENST00000609770 1337 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AL109954.1-202ENST00000564051 2148 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC018892.3-201ENST00000623986 2499 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC098799.1-201ENST00000504752 800 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC091544.8-201ENST00000619490 361 ntBASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CTC1Q2NKJ3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms