Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.53■□□□□ 0.56
DDR1Q08345 DUTP3-201ENST00000450025 415 ntBASIC18.53■□□□□ 0.56
DDR1Q08345 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.53■□□□□ 0.56
DDR1Q08345 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDR1Q08345 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 AC005041.3-201ENST00000606287 649 ntBASIC18.53■□□□□ 0.56
DDR1Q08345 AC009560.1-201ENST00000620208 434 ntBASIC18.53■□□□□ 0.56
DDR1Q08345 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.53■□□□□ 0.56
DDR1Q08345 AC013726.1-201ENST00000563747 2285 ntBASIC18.53■□□□□ 0.56
DDR1Q08345 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDR1Q08345 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDR1Q08345 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.53■□□□□ 0.56
DDR1Q08345 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.52■□□□□ 0.56
DDR1Q08345 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DDR1Q08345 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 KRT8P31-201ENST00000504812 1408 ntBASIC18.52■□□□□ 0.56
DDR1Q08345 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
DDR1Q08345 HIST2H2BA-201ENST00000412169 381 ntBASIC18.52■□□□□ 0.56
DDR1Q08345 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.52■□□□□ 0.56
DDR1Q08345 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.52■□□□□ 0.56
DDR1Q08345 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.52■□□□□ 0.56
DDR1Q08345 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.52■□□□□ 0.56
DDR1Q08345 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.52■□□□□ 0.56
DDR1Q08345 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.52■□□□□ 0.56
DDR1Q08345 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.52■□□□□ 0.56
DDR1Q08345 MIR3188-201ENST00000583494 85 ntBASIC18.52■□□□□ 0.56
DDR1Q08345 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDR1Q08345 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDR1Q08345 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.52■□□□□ 0.55
DDR1Q08345 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDR1Q08345 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDR1Q08345 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDR1Q08345 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.52■□□□□ 0.55
DDR1Q08345 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DDR1Q08345 HCG11-201ENST00000411553 5696 ntBASIC18.52■□□□□ 0.55
DDR1Q08345 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 PCDHB19P-201ENST00000570871 2371 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 RNA5SP359-201ENST00000364838 113 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 TLE1P1-201ENST00000422965 589 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 FTH1P22-201ENST00000456305 520 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 GCOM2-201ENST00000509133 1104 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDR1Q08345 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
DDR1Q08345 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.51■□□□□ 0.55
DDR1Q08345 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
DDR1Q08345 AC007326.1-201ENST00000604539 458 ntBASIC18.51■□□□□ 0.55
DDR1Q08345 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
DDR1Q08345 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
DDR1Q08345 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDR1Q08345 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms