Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.05□□□□□ -0.96
HSPG2P98160 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 AHCYP4-201ENST00000419201 1315 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC9.05□□□□□ -0.96
HSPG2P98160 AC098657.1-201ENST00000416270 1135 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 EEF1DP5-201ENST00000431410 772 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 HNRNPA1P2-207ENST00000432375 960 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 GNG10P1-201ENST00000452289 199 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC9.05□□□□□ -0.96
HSPG2P98160 CASP3-205ENST00000517513 964 ntTSL 5 BASIC9.05□□□□□ -0.96
HSPG2P98160 AC023968.2-201ENST00000560593 1049 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
HSPG2P98160 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC9.05□□□□□ -0.96
HSPG2P98160 AL050341.2-201ENST00000567508 1541 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 AGGF1P1-201ENST00000509500 2073 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC9.05□□□□□ -0.96
HSPG2P98160 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.05□□□□□ -0.96
HSPG2P98160 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC9.05□□□□□ -0.96
HSPG2P98160 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC9.05□□□□□ -0.96
HSPG2P98160 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC9.05□□□□□ -0.96
HSPG2P98160 AC020922.4-201ENST00000621389 339 ntBASIC9.05□□□□□ -0.96
HSPG2P98160 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HSPG2P98160 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.05□□□□□ -0.96
HSPG2P98160 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
HSPG2P98160 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 HNRNPA1P5-201ENST00000558213 966 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 PCDHA12-202ENST00000613593 2588 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 DKKL1P1-201ENST00000400550 698 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 AL157823.1-201ENST00000403727 628 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 OR8T1P-201ENST00000421347 918 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
HSPG2P98160 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 RN7SL578P-201ENST00000477781 283 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 ANKRD26P1-203ENST00000569528 966 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 RN7SL121P-201ENST00000584223 273 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.04□□□□□ -0.96
HSPG2P98160 ZBED1P1-201ENST00000502364 1930 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 AC104961.1-201ENST00000427605 771 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 GOLGA6L16P-201ENST00000441780 1299 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 AP003040.1-201ENST00000532044 1024 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC9.04□□□□□ -0.96
HSPG2P98160 COX5A-205ENST00000568517 582 ntTSL 3 BASIC9.04□□□□□ -0.96
HSPG2P98160 AP001462.1-201ENST00000594089 452 ntBASIC9.04□□□□□ -0.96
HSPG2P98160 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC9.04□□□□□ -0.96
HSPG2P98160 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HSPG2P98160 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms