Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SRP9P49458 BASP1P1-201ENST00000430708 665 ntBASIC13.57□□□□□ -0.24
SRP9P49458 AC055876.3-201ENST00000431496 288 ntBASIC13.57□□□□□ -0.24
SRP9P49458 AL512638.1-201ENST00000457493 794 ntBASIC13.57□□□□□ -0.24
SRP9P49458 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.57□□□□□ -0.24
SRP9P49458 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.57□□□□□ -0.24
SRP9P49458 AC097493.3-201ENST00000509725 367 ntBASIC13.57□□□□□ -0.24
SRP9P49458 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.57□□□□□ -0.24
SRP9P49458 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.57□□□□□ -0.24
SRP9P49458 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.57□□□□□ -0.24
SRP9P49458 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.57□□□□□ -0.24
SRP9P49458 AC027796.2-201ENST00000575326 344 ntBASIC13.57□□□□□ -0.24
SRP9P49458 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 AC138649.4-201ENST00000612222 287 ntBASIC13.57□□□□□ -0.24
SRP9P49458 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SRP9P49458 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SRP9P49458 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 REXO1L1P-202ENST00000608646 1974 ntBASIC13.56□□□□□ -0.24
SRP9P49458 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 CICP8-201ENST00000455800 2813 ntBASIC13.56□□□□□ -0.24
SRP9P49458 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 MTHFR-210ENST00000641407 2387 ntBASIC13.56□□□□□ -0.24
SRP9P49458 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.56□□□□□ -0.24
SRP9P49458 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.56□□□□□ -0.24
SRP9P49458 RPL37AP1-201ENST00000412502 279 ntBASIC13.56□□□□□ -0.24
SRP9P49458 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 AL080243.2-201ENST00000418783 582 ntBASIC13.56□□□□□ -0.24
SRP9P49458 AC241585.1-201ENST00000433527 519 ntBASIC13.56□□□□□ -0.24
SRP9P49458 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.56□□□□□ -0.24
SRP9P49458 EEF1DP4-201ENST00000446006 880 ntBASIC13.56□□□□□ -0.24
SRP9P49458 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.56□□□□□ -0.24
SRP9P49458 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.56□□□□□ -0.24
SRP9P49458 RN7SL618P-201ENST00000477850 296 ntBASIC13.56□□□□□ -0.24
SRP9P49458 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.56□□□□□ -0.24
SRP9P49458 MIR4313-201ENST00000580760 101 ntBASIC13.56□□□□□ -0.24
SRP9P49458 AL450472.2-201ENST00000603663 1156 ntBASIC13.56□□□□□ -0.24
SRP9P49458 TEX28P1-201ENST00000613479 1221 ntBASIC13.56□□□□□ -0.24
SRP9P49458 TEX28P2-201ENST00000617764 1221 ntBASIC13.56□□□□□ -0.24
SRP9P49458 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 COL6A4P2-202ENST00000504443 2753 ntBASIC13.56□□□□□ -0.24
SRP9P49458 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SRP9P49458 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SRP9P49458 MBLAC2-202ENST00000514906 1936 ntBASIC13.56□□□□□ -0.24
SRP9P49458 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms