Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.08□□□□□ -0.48
CDC34P49427 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CDC34P49427 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 RHOQP3-201ENST00000437982 621 ntBASIC12.08□□□□□ -0.48
CDC34P49427 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 TPT1P11-201ENST00000458482 498 ntBASIC12.08□□□□□ -0.48
CDC34P49427 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.08□□□□□ -0.48
CDC34P49427 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 AC026979.3-201ENST00000607315 403 ntBASIC12.08□□□□□ -0.48
CDC34P49427 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.08□□□□□ -0.48
CDC34P49427 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 AC007787.1-201ENST00000588095 1583 ntBASIC12.08□□□□□ -0.48
CDC34P49427 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CDC34P49427 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC34P49427 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC34P49427 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
CDC34P49427 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.07□□□□□ -0.48
CDC34P49427 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
CDC34P49427 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 PRELID1P1-202ENST00000567272 903 ntBASIC12.07□□□□□ -0.48
CDC34P49427 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.07□□□□□ -0.48
CDC34P49427 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.07□□□□□ -0.48
CDC34P49427 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CDC34P49427 TP73-AS1-207ENST00000624167 988 ntBASIC12.07□□□□□ -0.48
CDC34P49427 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CDC34P49427 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC34P49427 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms