Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 AL080243.2-201ENST00000418783 582 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 GPS2P2-201ENST00000430745 888 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 SPDYE14P-201ENST00000442619 822 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 MTDHP5-201ENST00000598980 586 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 AL589739.1-201ENST00000607720 493 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AL513210.1-201ENST00000629608 234 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AF228730.6-201ENST00000641497 218 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AL033527.5-202ENST00000641632 1098 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 AC084121.3-201ENST00000641716 218 ntBASIC12.93□□□□□ -0.34
HIST1H1DP16402 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
HIST1H1DP16402 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.93□□□□□ -0.34
HIST1H1DP16402 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 FDX1P1-201ENST00000449115 551 ntBASIC12.92□□□□□ -0.34
HIST1H1DP16402 CEND1P1-201ENST00000451006 455 ntBASIC12.92□□□□□ -0.34
HIST1H1DP16402 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 AC026150.2-201ENST00000564693 1156 ntBASIC12.92□□□□□ -0.34
HIST1H1DP16402 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 AC018665.1-201ENST00000622927 1362 ntBASIC12.92□□□□□ -0.34
HIST1H1DP16402 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HIST1H1DP16402 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.92□□□□□ -0.34
HIST1H1DP16402 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms