Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BMP4P12644 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.06□□□□□ -0.16
BMP4P12644 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BMP4P12644 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BMP4P12644 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
BMP4P12644 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 AC105206.1-202ENST00000314927 2368 ntBASIC14.05□□□□□ -0.16
BMP4P12644 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.05□□□□□ -0.16
BMP4P12644 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 TREML5P-201ENST00000421694 576 ntBASIC14.05□□□□□ -0.16
BMP4P12644 AC142381.1-201ENST00000426099 345 ntBASIC14.05□□□□□ -0.16
BMP4P12644 AC241585.1-201ENST00000433527 519 ntBASIC14.05□□□□□ -0.16
BMP4P12644 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.05□□□□□ -0.16
BMP4P12644 TERF1P3-201ENST00000505638 1227 ntBASIC14.05□□□□□ -0.16
BMP4P12644 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.05□□□□□ -0.16
BMP4P12644 AL138918.1-201ENST00000568306 659 ntBASIC14.05□□□□□ -0.16
BMP4P12644 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 MIR4453-201ENST00000584019 89 ntBASIC14.05□□□□□ -0.16
BMP4P12644 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.05□□□□□ -0.16
BMP4P12644 AC007967.4-201ENST00000614700 386 ntBASIC14.05□□□□□ -0.16
BMP4P12644 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.05□□□□□ -0.16
BMP4P12644 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BMP4P12644 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 FO538757.1-201ENST00000623083 1397 ntBASIC14.05□□□□□ -0.16
BMP4P12644 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BMP4P12644 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
BMP4P12644 AP3S2-216ENST00000617003 1561 ntBASIC14.05□□□□□ -0.16
BMP4P12644 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BMP4P12644 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BMP4P12644 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BMP4P12644 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.04□□□□□ -0.16
BMP4P12644 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.04□□□□□ -0.16
BMP4P12644 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BMP4P12644 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BMP4P12644 AC152010.1-201ENST00000415779 2006 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms