Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
THBS1P07996 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
THBS1P07996 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
THBS1P07996 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
THBS1P07996 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
THBS1P07996 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
THBS1P07996 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 MIR600HG-201ENST00000449175 5984 ntBASIC14.02□□□□□ -0.17
THBS1P07996 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.01□□□□□ -0.17
THBS1P07996 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 AC005912.2-201ENST00000619492 2400 ntBASIC14.01□□□□□ -0.17
THBS1P07996 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 MTHFR-210ENST00000641407 2387 ntBASIC14.01□□□□□ -0.17
THBS1P07996 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.01□□□□□ -0.17
THBS1P07996 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.01□□□□□ -0.17
THBS1P07996 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.01□□□□□ -0.17
THBS1P07996 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 INTS4P2-202ENST00000614726 2019 ntBASIC14.01□□□□□ -0.17
THBS1P07996 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.01□□□□□ -0.17
THBS1P07996 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.01□□□□□ -0.17
THBS1P07996 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
THBS1P07996 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14□□□□□ -0.17
THBS1P07996 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14□□□□□ -0.17
THBS1P07996 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
THBS1P07996 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
THBS1P07996 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
THBS1P07996 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
THBS1P07996 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 OSM-203ENST00000403463 464 ntTSL 3 BASIC14□□□□□ -0.17
THBS1P07996 AP005018.1-201ENST00000525475 301 ntBASIC14□□□□□ -0.17
THBS1P07996 CR383656.12-201ENST00000549567 513 ntBASIC14□□□□□ -0.17
THBS1P07996 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14□□□□□ -0.17
THBS1P07996 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14□□□□□ -0.17
THBS1P07996 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14□□□□□ -0.17
THBS1P07996 AC009118.2-201ENST00000613275 655 ntBASIC14□□□□□ -0.17
THBS1P07996 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
THBS1P07996 AC007431.3-201ENST00000623221 587 ntBASIC14□□□□□ -0.17
THBS1P07996 BX539320.1-201ENST00000623759 877 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms