Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.31□□□□□ -0.28
SFTPBP07988 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SFTPBP07988 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SFTPBP07988 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SFTPBP07988 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SFTPBP07988 AC013726.1-201ENST00000563747 2285 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 AL137784.3-201ENST00000623858 2288 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 CETN4P-206ENST00000642099 2168 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SFTPBP07988 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.3□□□□□ -0.28
SFTPBP07988 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 TARDBPP1-201ENST00000442013 1203 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.3□□□□□ -0.28
SFTPBP07988 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.3□□□□□ -0.28
SFTPBP07988 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.3□□□□□ -0.28
SFTPBP07988 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.3□□□□□ -0.28
SFTPBP07988 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 CICP11-201ENST00000434745 2827 ntBASIC13.3□□□□□ -0.28
SFTPBP07988 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.3□□□□□ -0.28
SFTPBP07988 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SFTPBP07988 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.3□□□□□ -0.28
SFTPBP07988 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.29□□□□□ -0.28
SFTPBP07988 AL122018.1-201ENST00000446607 2310 ntBASIC13.29□□□□□ -0.28
SFTPBP07988 AC084364.1-201ENST00000551967 1556 ntBASIC13.29□□□□□ -0.28
SFTPBP07988 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SFTPBP07988 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SFTPBP07988 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms