Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HIST1H2ABP04908 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 FAM8A3P-201ENST00000427218 844 ntBASIC13.93□□□□□ -0.18
HIST1H2ABP04908 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 MEIS3P1-201ENST00000495167 958 ntBASIC13.93□□□□□ -0.18
HIST1H2ABP04908 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 DUX4L27-201ENST00000554796 1261 ntBASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AL844908.2-201ENST00000609461 460 ntBASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.93□□□□□ -0.18
HIST1H2ABP04908 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H2ABP04908 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 AC007686.3-201ENST00000619017 3487 ntBASIC13.92□□□□□ -0.18
HIST1H2ABP04908 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 AC114501.2-201ENST00000439631 535 ntBASIC13.92□□□□□ -0.18
HIST1H2ABP04908 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H2ABP04908 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms