Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
CDH16O75309 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH16O75309 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH16O75309 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CDH16O75309 AL592309.1-201ENST00000443127 649 ntBASIC15.41■□□□□ 0.06
CDH16O75309 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 AC092865.5-201ENST00000545435 363 ntBASIC15.41■□□□□ 0.06
CDH16O75309 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CDH16O75309 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH16O75309 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.41■□□□□ 0.06
CDH16O75309 C20orf181-201ENST00000623918 480 ntBASIC15.41■□□□□ 0.06
CDH16O75309 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 AC023090.2-201ENST00000625182 2110 ntBASIC15.41■□□□□ 0.06
CDH16O75309 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 AC126335.2-201ENST00000623362 4637 ntBASIC15.41■□□□□ 0.06
CDH16O75309 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH16O75309 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH16O75309 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH16O75309 Z97205.2-201ENST00000564697 1639 ntBASIC15.4■□□□□ 0.06
CDH16O75309 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH16O75309 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH16O75309 AC023274.1-201ENST00000418278 595 ntBASIC15.4■□□□□ 0.06
CDH16O75309 UPF3AP3-201ENST00000420996 769 ntBASIC15.4■□□□□ 0.06
CDH16O75309 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 AC018529.1-201ENST00000613063 361 ntBASIC15.4■□□□□ 0.06
CDH16O75309 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH16O75309 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH16O75309 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH16O75309 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH16O75309 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH16O75309 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.4■□□□□ 0.06
CDH16O75309 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
CDH16O75309 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH16O75309 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH16O75309 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH16O75309 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH16O75309 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH16O75309 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms