Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAF3IP2O43734 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 KLF2P2-201ENST00000416807 1039 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AP001063.1-201ENST00000568332 529 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AP005019.2-201ENST00000615104 511 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RPSAP52-203ENST00000622976 1023 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AL033527.5-201ENST00000641382 801 ntBASIC13.54□□□□□ -0.24
TRAF3IP2O43734 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAF3IP2O43734 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms