Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 AC232323.1-201ENST00000540724 2099 ntBASIC11.02□□□□□ -0.64
RS1O15537 REXO1L5P-201ENST00000622260 2098 ntBASIC11.02□□□□□ -0.64
RS1O15537 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.02□□□□□ -0.64
RS1O15537 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.02□□□□□ -0.64
RS1O15537 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RS1O15537 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
RS1O15537 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
RS1O15537 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.02□□□□□ -0.65
RS1O15537 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 AC107890.1-201ENST00000422478 521 ntBASIC11.02□□□□□ -0.65
RS1O15537 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.02□□□□□ -0.65
RS1O15537 ZNF890P-202ENST00000530367 1156 ntBASIC11.02□□□□□ -0.65
RS1O15537 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 TIMM17BP1-201ENST00000545713 516 ntBASIC11.02□□□□□ -0.65
RS1O15537 AC044860.1-202ENST00000559481 777 ntBASIC11.02□□□□□ -0.65
RS1O15537 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.02□□□□□ -0.65
RS1O15537 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC11.02□□□□□ -0.65
RS1O15537 AC000095.1-201ENST00000603208 874 ntBASIC11.02□□□□□ -0.65
RS1O15537 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
RS1O15537 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.02□□□□□ -0.65
RS1O15537 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RS1O15537 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.02□□□□□ -0.65
RS1O15537 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 REXO1L4P-201ENST00000605109 1937 ntBASIC11.01□□□□□ -0.65
RS1O15537 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.01□□□□□ -0.65
RS1O15537 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 AL158211.3-201ENST00000607385 239 ntBASIC11.01□□□□□ -0.65
RS1O15537 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.01□□□□□ -0.65
RS1O15537 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.01□□□□□ -0.65
RS1O15537 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.01□□□□□ -0.65
RS1O15537 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.01□□□□□ -0.65
RS1O15537 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RS1O15537 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RS1O15537 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms