Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 AL157792.1-201ENST00000488281 530 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 SIGLEC18P-201ENST00000602271 909 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 AL132780.4-201ENST00000624870 1135 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SBNO1A3KN83 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.19■□□□□ 0.82
SBNO1A3KN83 DOC2GP-204ENST00000639052 2548 ntBASIC20.19■□□□□ 0.82
SBNO1A3KN83 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 AC084781.1-201ENST00000613737 656 ntBASIC20.18■□□□□ 0.82
SBNO1A3KN83 AL359258.3-201ENST00000622910 2331 ntBASIC20.18■□□□□ 0.82
SBNO1A3KN83 AC005618.3-201ENST00000624928 458 ntBASIC20.18■□□□□ 0.82
SBNO1A3KN83 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.18■□□□□ 0.82
SBNO1A3KN83 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 RN7SL81P-201ENST00000493781 261 ntBASIC20.17■□□□□ 0.82
SBNO1A3KN83 GCOM2-201ENST00000509133 1104 ntBASIC20.17■□□□□ 0.82
SBNO1A3KN83 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 AC009560.1-201ENST00000620208 434 ntBASIC20.17■□□□□ 0.82
SBNO1A3KN83 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
SBNO1A3KN83 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SBNO1A3KN83 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 BANF1P3-201ENST00000412556 261 ntBASIC20.16■□□□□ 0.82
SBNO1A3KN83 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 RPSAP15-201ENST00000448168 861 ntBASIC20.16■□□□□ 0.82
SBNO1A3KN83 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SBNO1A3KN83 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
SBNO1A3KN83 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms