Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 GPS2P2-201ENST00000430745 888 ntBASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 SPDYE14P-201ENST00000442619 822 ntBASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 Z92544.3-201ENST00000624747 417 ntBASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 AC097359.2-201ENST00000604992 2389 ntBASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
R3HCC1Q9Y3T6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 FOXO1B-201ENST00000504678 1527 ntBASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PPT1-213ENST00000641319 2388 ntBASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
R3HCC1Q9Y3T6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
R3HCC1Q9Y3T6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms