Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 GPALPP1-207ENST00000611650 899 ntBASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
HHLA3Q9XRX5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 AC089987.1-201ENST00000551654 2209 ntBASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 PTENP1-202ENST00000532280 3996 ntBASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 AC023024.2-201ENST00000623561 1993 ntBASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
HHLA3Q9XRX5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SBF1P1-201ENST00000444527 5631 ntBASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC069120.2-201ENST00000524091 540 ntBASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 AC097359.2-201ENST00000604992 2389 ntBASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HHLA3Q9XRX5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HHLA3Q9XRX5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms