Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AP001889.1-201ENST00000525414 633 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AC015936.2-201ENST00000593177 259 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AC145423.3-201ENST00000615987 467 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CFTRP2-201ENST00000634304 199 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CU639417.3-201ENST00000624240 1404 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AC232323.1-201ENST00000540724 2099 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 AL138709.1-201ENST00000614840 1693 ntBASIC15.99■□□□□ 0.15
PCDHGC3Q9UN70 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MTHFR-210ENST00000641407 2387 ntBASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.98■□□□□ 0.15
PCDHGC3Q9UN70 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms