Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 FDX1P1-201ENST00000449115 551 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC018712.1-201ENST00000455767 687 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC092910.1-201ENST00000482027 1129 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC093909.1-201ENST00000504731 1122 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC073592.4-201ENST00000623827 446 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC073548.1-201ENST00000624088 1882 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 AC127383.1-201ENST00000444697 1800 ntBASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBQLN2Q9UHD9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 HLA-A-201ENST00000376802 1334 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AC139887.3-201ENST00000568585 713 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TERC-201ENST00000602385 541 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 MIR7706-201ENST00000613747 67 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 BNIP3P1-202ENST00000550043 1585 ntBASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
UBQLN2Q9UHD9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms