Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 MIR8072-201ENST00000614241 80 ntBASIC12.62□□□□□ -0.39
CALYQ9NYX4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 AC007431.3-201ENST00000623221 587 ntBASIC12.62□□□□□ -0.39
CALYQ9NYX4 AC106881.1-201ENST00000605849 3329 ntBASIC12.62□□□□□ -0.39
CALYQ9NYX4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 AL158070.2-201ENST00000623713 1621 ntBASIC12.62□□□□□ -0.39
CALYQ9NYX4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.62□□□□□ -0.39
CALYQ9NYX4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CALYQ9NYX4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 C1QBPP1-201ENST00000400117 770 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AL442647.2-201ENST00000429864 857 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 BCRP1-201ENST00000444246 691 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AL096865.1-201ENST00000606796 927 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 BX539320.1-201ENST00000623759 877 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 AL157414.3-201ENST00000624276 1954 ntBASIC12.61□□□□□ -0.39
CALYQ9NYX4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.61□□□□□ -0.39
CALYQ9NYX4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CALYQ9NYX4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms