Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 BEND3P1-201ENST00000421591 1944 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 MEIS3P1-201ENST00000495167 958 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CR383656.12-201ENST00000549567 513 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AL008721.1-201ENST00000609964 604 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AC004840.1-201ENST00000636359 365 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AC136759.1-202ENST00000530858 2194 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 Z97205.2-201ENST00000564697 1639 ntBASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AC074338.1-201ENST00000416825 156 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 GNAQP1-201ENST00000444815 1067 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AC135586.1-201ENST00000539323 574 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AL079307.3-201ENST00000556114 283 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AC025181.2-201ENST00000606994 802 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AC018529.2-202ENST00000611482 3087 ntBASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
FOXP3Q9BZS1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms