Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 RN7SL8P-201ENST00000461771 266 ntBASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 AC138894.2-201ENST00000602838 371 ntBASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 AC074138.1-201ENST00000611182 1303 ntBASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 PCDHB19P-201ENST00000570871 2371 ntBASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH11XQ9BZA7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH11XQ9BZA7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 RPL8P2-201ENST00000430538 502 ntBASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 AC087045.2-201ENST00000606279 1003 ntBASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH11XQ9BZA7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 AC008723.1-201ENST00000506922 207 ntBASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH11XQ9BZA7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH11XQ9BZA7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH11XQ9BZA7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms