Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC073592.8-201ENST00000624126 511 ntBASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SHANK2-AS3Q9BTD1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CNN2P11-201ENST00000429351 262 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CNN2P2-201ENST00000443536 909 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CNN2P3-201ENST00000450201 906 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AP001267.2-201ENST00000532619 2086 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ST20-AS1-201ENST00000560255 4223 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 AL136317.3-201ENST00000618497 906 ntBASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SHANK2-AS3Q9BTD1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms