Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCA3Q99758 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ABCA3Q99758 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 SSR4P1-203ENST00000599569 2260 ntBASIC19.5■□□□□ 0.71
ABCA3Q99758 TEKT4P2-202ENST00000559466 1312 ntBASIC19.5■□□□□ 0.71
ABCA3Q99758 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.5■□□□□ 0.71
ABCA3Q99758 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.5■□□□□ 0.71
ABCA3Q99758 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.5■□□□□ 0.71
ABCA3Q99758 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ABCA3Q99758 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.5■□□□□ 0.71
ABCA3Q99758 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.5■□□□□ 0.71
ABCA3Q99758 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.5■□□□□ 0.71
ABCA3Q99758 TREHP1-201ENST00000531328 465 ntBASIC19.5■□□□□ 0.71
ABCA3Q99758 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ABCA3Q99758 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.5■□□□□ 0.71
ABCA3Q99758 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.5■□□□□ 0.71
ABCA3Q99758 AC008972.2-201ENST00000606587 494 ntBASIC19.5■□□□□ 0.71
ABCA3Q99758 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCA3Q99758 NKILA-202ENST00000614771 2598 ntBASIC19.5■□□□□ 0.71
ABCA3Q99758 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.49■□□□□ 0.71
ABCA3Q99758 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.49■□□□□ 0.71
ABCA3Q99758 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
ABCA3Q99758 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 AL357373.1-201ENST00000394974 322 ntBASIC19.49■□□□□ 0.71
ABCA3Q99758 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.49■□□□□ 0.71
ABCA3Q99758 AC007250.1-201ENST00000608934 338 ntBASIC19.49■□□□□ 0.71
ABCA3Q99758 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.49■□□□□ 0.71
ABCA3Q99758 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 AC023024.2-201ENST00000623561 1993 ntBASIC19.49■□□□□ 0.71
ABCA3Q99758 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.49■□□□□ 0.71
ABCA3Q99758 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCA3Q99758 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCA3Q99758 AC006372.4-201ENST00000624122 1543 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.48■□□□□ 0.71
ABCA3Q99758 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 ALG1L3P-201ENST00000503331 765 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.48■□□□□ 0.71
ABCA3Q99758 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AL133467.4-201ENST00000602953 725 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 AL591122.2-201ENST00000624125 1853 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 AL109809.1-201ENST00000418979 1367 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCA3Q99758 ACTG1P19-201ENST00000418987 1116 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 AC098934.1-203ENST00000442868 1262 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 RPL35P9-201ENST00000446059 350 ntBASIC19.48■□□□□ 0.71
ABCA3Q99758 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.48■□□□□ 0.71
ABCA3Q99758 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCA3Q99758 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms