Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC139749.1-202ENST00000617529 3139 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC055811.4-201ENST00000624039 1754 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 AC018665.1-201ENST00000622927 1362 ntBASIC11.89□□□□□ -0.51
TRGV9Q99603 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
TRGV9Q99603 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
TRGV9Q99603 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.88□□□□□ -0.51
TRGV9Q99603 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 UPF3AP3-201ENST00000420996 769 ntBASIC11.88□□□□□ -0.51
TRGV9Q99603 BX842568.4-201ENST00000421222 227 ntBASIC11.88□□□□□ -0.51
TRGV9Q99603 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.88□□□□□ -0.51
TRGV9Q99603 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.88□□□□□ -0.51
TRGV9Q99603 TIMM17BP1-201ENST00000545713 516 ntBASIC11.88□□□□□ -0.51
TRGV9Q99603 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.88□□□□□ -0.51
TRGV9Q99603 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
TRGV9Q99603 AC136759.1-202ENST00000530858 2194 ntBASIC11.88□□□□□ -0.51
TRGV9Q99603 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.88□□□□□ -0.51
TRGV9Q99603 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
TRGV9Q99603 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC027601.5-201ENST00000624065 2482 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.87□□□□□ -0.51
TRGV9Q99603 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC015656.1-201ENST00000624209 3578 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.87□□□□□ -0.51
TRGV9Q99603 AP001267.2-201ENST00000532619 2086 ntBASIC11.87□□□□□ -0.51
TRGV9Q99603 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
TRGV9Q99603 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
TRGV9Q99603 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms