Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC078875.1-201ENST00000431907 724 ntBASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 CCL25-202ENST00000315626 450 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 SIGLEC18P-201ENST00000602271 909 ntBASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 ABHD17AP9-201ENST00000561925 548 ntBASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.65□□□□□ -0.38
CSMD1Q96PZ7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.65□□□□□ -0.39
CSMD1Q96PZ7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CSMD1Q96PZ7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CSMD1Q96PZ7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AL645933.1-201ENST00000440087 609 ntBASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AP000358.1-201ENST00000456260 156 ntBASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 RN7SL470P-201ENST00000583069 259 ntBASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms