Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NSMCE2Q96MF7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AL133267.1-201ENST00000398220 340 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SPDYE17-201ENST00000412399 783 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SLC25A6P4-201ENST00000586535 553 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC025181.2-201ENST00000606994 802 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AC011474.4-201ENST00000623523 2076 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 AL137784.3-201ENST00000623858 2288 ntBASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.41□□□□□ -0.1
NSMCE2Q96MF7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 MST1P2-201ENST00000457982 2291 ntBASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 LILRP1-201ENST00000444199 1370 ntBASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NSMCE2Q96MF7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms