Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 AP001582.1-201ENST00000525856 295 ntBASIC11.94□□□□□ -0.5
RAX2Q96IS3 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 PDIA3P1-201ENST00000471856 1510 ntBASIC11.94□□□□□ -0.5
RAX2Q96IS3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 MSTO2P-201ENST00000314835 1709 ntBASIC11.94□□□□□ -0.5
RAX2Q96IS3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAX2Q96IS3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.94□□□□□ -0.5
RAX2Q96IS3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 AC012441.1-201ENST00000446669 685 ntBASIC11.93□□□□□ -0.5
RAX2Q96IS3 KLF2P4-201ENST00000451959 1225 ntBASIC11.93□□□□□ -0.5
RAX2Q96IS3 CTBP2P5-201ENST00000454986 1264 ntBASIC11.93□□□□□ -0.5
RAX2Q96IS3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.93□□□□□ -0.5
RAX2Q96IS3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
RAX2Q96IS3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAX2Q96IS3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms