Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC055876.2-201ENST00000531834 546 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 BRI3BPP1-201ENST00000594224 787 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 AC099568.2-201ENST00000609194 695 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 AC006538.3-201ENST00000612495 578 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 AL662799.1-202ENST00000614205 422 ntBASIC16.11■□□□□ 0.17
TRIM11Q96F44 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM11Q96F44 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM11Q96F44 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AL157414.3-201ENST00000624276 1954 ntBASIC16.1■□□□□ 0.17
TRIM11Q96F44 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 HLA-K-203ENST00000430151 1046 ntBASIC16.1■□□□□ 0.17
TRIM11Q96F44 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AC104596.2-201ENST00000512793 793 ntBASIC16.1■□□□□ 0.17
TRIM11Q96F44 RNA5SP421-201ENST00000516864 134 ntBASIC16.1■□□□□ 0.17
TRIM11Q96F44 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM11Q96F44 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM11Q96F44 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC005089.1-201ENST00000619486 2241 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 RFPL4AP1-201ENST00000530883 850 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC004790.1-201ENST00000612686 536 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC007431.3-201ENST00000623221 587 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 BX539320.1-201ENST00000623759 877 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 AC018665.1-201ENST00000622927 1362 ntBASIC16.09■□□□□ 0.17
TRIM11Q96F44 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM11Q96F44 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms