Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HPS1Q92902 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 MIR648-201ENST00000385046 94 ntBASIC14.09□□□□□ -0.15
HPS1Q92902 AL627223.1-201ENST00000416693 442 ntBASIC14.09□□□□□ -0.15
HPS1Q92902 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.09□□□□□ -0.15
HPS1Q92902 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 FAM86GP-201ENST00000448322 971 ntBASIC14.09□□□□□ -0.15
HPS1Q92902 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC14.09□□□□□ -0.15
HPS1Q92902 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
HPS1Q92902 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 LINC00628-201ENST00000628516 1289 ntBASIC14.09□□□□□ -0.15
HPS1Q92902 AC009452.1-201ENST00000640823 606 ntBASIC14.09□□□□□ -0.15
HPS1Q92902 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
HPS1Q92902 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.09□□□□□ -0.15
HPS1Q92902 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HPS1Q92902 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.09□□□□□ -0.15
HPS1Q92902 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HPS1Q92902 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.09□□□□□ -0.15
HPS1Q92902 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.08□□□□□ -0.15
HPS1Q92902 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HPS1Q92902 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HPS1Q92902 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
HPS1Q92902 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HPS1Q92902 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HPS1Q92902 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HPS1Q92902 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.08□□□□□ -0.16
HPS1Q92902 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.08□□□□□ -0.16
HPS1Q92902 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 AL359881.3-201ENST00000602640 1721 ntBASIC14.08□□□□□ -0.16
HPS1Q92902 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.08□□□□□ -0.16
HPS1Q92902 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.08□□□□□ -0.16
HPS1Q92902 AC005237.2-201ENST00000434368 219 ntBASIC14.08□□□□□ -0.16
HPS1Q92902 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC14.08□□□□□ -0.16
HPS1Q92902 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.08□□□□□ -0.16
HPS1Q92902 AL009183.1-201ENST00000603760 355 ntBASIC14.08□□□□□ -0.16
HPS1Q92902 AC099522.2-201ENST00000607001 744 ntBASIC14.08□□□□□ -0.16
HPS1Q92902 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HPS1Q92902 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HPS1Q92902 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
HPS1Q92902 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HPS1Q92902 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.08□□□□□ -0.16
HPS1Q92902 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.08□□□□□ -0.16
HPS1Q92902 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.08□□□□□ -0.16
HPS1Q92902 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms