Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
USP6NLQ92738 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
USP6NLQ92738 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.1■□□□□ 0.33
USP6NLQ92738 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP6NLQ92738 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
USP6NLQ92738 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.1■□□□□ 0.33
USP6NLQ92738 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
USP6NLQ92738 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.09■□□□□ 0.33
USP6NLQ92738 FAM58BP-201ENST00000439056 645 ntBASIC17.09■□□□□ 0.33
USP6NLQ92738 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.09■□□□□ 0.33
USP6NLQ92738 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.09■□□□□ 0.33
USP6NLQ92738 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.09■□□□□ 0.33
USP6NLQ92738 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
USP6NLQ92738 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.09■□□□□ 0.33
USP6NLQ92738 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.09■□□□□ 0.33
USP6NLQ92738 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
USP6NLQ92738 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP6NLQ92738 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP6NLQ92738 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP6NLQ92738 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 AC132872.4-202ENST00000622924 2756 ntBASIC17.08■□□□□ 0.33
USP6NLQ92738 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.08■□□□□ 0.33
USP6NLQ92738 AL157414.3-201ENST00000624276 1954 ntBASIC17.08■□□□□ 0.33
USP6NLQ92738 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP6NLQ92738 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP6NLQ92738 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP6NLQ92738 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP6NLQ92738 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP6NLQ92738 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP6NLQ92738 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.08■□□□□ 0.32
USP6NLQ92738 KLF2P1-201ENST00000447438 1042 ntBASIC17.08■□□□□ 0.32
USP6NLQ92738 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.08■□□□□ 0.32
USP6NLQ92738 AC011491.1-203ENST00000637688 543 ntBASIC17.08■□□□□ 0.32
USP6NLQ92738 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP6NLQ92738 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP6NLQ92738 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.08■□□□□ 0.32
USP6NLQ92738 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.08■□□□□ 0.32
USP6NLQ92738 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP6NLQ92738 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
USP6NLQ92738 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.07■□□□□ 0.32
USP6NLQ92738 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP6NLQ92738 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.07■□□□□ 0.32
USP6NLQ92738 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms