Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 AL590235.1-201ENST00000564650 861 ntBASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 LINC00244-201ENST00000625073 613 ntBASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 ST13P19-201ENST00000442505 1124 ntBASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 AP002353.1-201ENST00000528257 1599 ntBASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 AC092862.1-201ENST00000541534 533 ntBASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ARHGEF40Q8TER5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 AC023906.1-201ENST00000486386 453 ntBASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 KRT8P2-201ENST00000556193 944 ntBASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.74■■□□□ 1.07
ARHGEF40Q8TER5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 FOXN3-AS2-201ENST00000554071 1262 ntBASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 AC020904.3-201ENST00000624199 442 ntBASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 AP000769.1-203ENST00000637245 208 ntBASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC21.73■■□□□ 1.07
ARHGEF40Q8TER5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC009093.10-201ENST00000641956 1442 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AL512599.1-201ENST00000430724 685 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 RPS23-207ENST00000511844 530 ntTSL 2 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 IGHEP2-201ENST00000519308 1256 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC068831.5-201ENST00000557387 328 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC124068.2-201ENST00000569473 1109 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC092127.1-201ENST00000567093 3455 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 FUCA1P1-201ENST00000374476 1351 ntBASIC21.72■■□□□ 1.07
ARHGEF40Q8TER5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ARHGEF40Q8TER5 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms