Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 KRT8P14-201ENST00000414254 1442 ntBASIC16.11■□□□□ 0.17
UBA3Q8TBC4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBA3Q8TBC4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 USP32P1-208ENST00000506594 1164 ntBASIC16.1■□□□□ 0.17
UBA3Q8TBC4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 AC106760.1-201ENST00000508690 800 ntBASIC16.1■□□□□ 0.17
UBA3Q8TBC4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBA3Q8TBC4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AC145423.3-201ENST00000615987 467 ntBASIC16.09■□□□□ 0.17
UBA3Q8TBC4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 PCDHA3-202ENST00000532566 4594 ntBASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBA3Q8TBC4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBA3Q8TBC4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBA3Q8TBC4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBA3Q8TBC4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms