Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC100757.3-201ENST00000622361 1406 ntBASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 FAM86GP-201ENST00000448322 971 ntBASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC097493.3-201ENST00000509725 367 ntBASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 IGHV3-42-201ENST00000520410 361 ntBASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC079781.4-201ENST00000641908 219 ntBASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLHC1Q8NHS4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AC087499.5-201ENST00000452760 1342 ntBASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AC004461.2-201ENST00000629517 803 ntBASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CLHC1Q8NHS4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CLHC1Q8NHS4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CLHC1Q8NHS4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms