Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 AL133267.1-201ENST00000398220 340 ntBASIC13□□□□□ -0.33
CLDND2Q8NHS1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 KLF2P4-201ENST00000451959 1225 ntBASIC13□□□□□ -0.33
CLDND2Q8NHS1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 AP001889.1-201ENST00000525414 633 ntBASIC13□□□□□ -0.33
CLDND2Q8NHS1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13□□□□□ -0.33
CLDND2Q8NHS1 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CLDND2Q8NHS1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC005229.1-201ENST00000392885 409 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 BNIP3P42-201ENST00000454982 569 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AP001063.1-201ENST00000568332 529 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MIR4313-201ENST00000580760 101 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 BNIP3P29-201ENST00000598302 571 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC011447.5-201ENST00000616168 564 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 MIR6799-201ENST00000620297 69 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 AC005252.2-201ENST00000624630 1141 ntBASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CLDND2Q8NHS1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms