Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 AC011467.4-201ENST00000594891 528 ntBASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 GPALPP1-207ENST00000611650 899 ntBASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 AL158212.4-201ENST00000624062 1286 ntBASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF439Q8NDP4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 LINC00528-201ENST00000600723 2160 ntBASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 AL589987.1-201ENST00000453380 819 ntBASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 MEIS3P1-201ENST00000495167 958 ntBASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 SRD5A3P1-201ENST00000603021 949 ntBASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 AC106028.4-201ENST00000614509 607 ntBASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZNF439Q8NDP4 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ZNF439Q8NDP4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms