Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.9□□□□□ -0.19
COL27A1Q8IZC6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
COL27A1Q8IZC6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC018463.1-201ENST00000456674 917 ntBASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC079328.2-201ENST00000561241 3354 ntBASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC007952.4-201ENST00000573866 637 ntBASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.89□□□□□ -0.19
COL27A1Q8IZC6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 AC073869.2-201ENST00000417338 1026 ntBASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 AL139008.1-201ENST00000437894 228 ntBASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COL27A1Q8IZC6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 AC139712.1-201ENST00000378256 1875 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 OR8T1P-201ENST00000421347 918 ntBASIC13.87□□□□□ -0.19
COL27A1Q8IZC6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms